Abstract: A non-redundant sequence was constructed by removing overlaps between neighboring BACs. This FASTA file contains two kinds of sequences: (i) fragments of BAC sequence contigs and (ii) fragments of contigs of the whole-genome shotgun assembly of cv. Morex that harbor high-confidence genes missing from the BAC assemblies. The fragment coordinates are specified in the header line of each fragment (e.g. HVVMRXALLMA0201C17_C2:3198-6633 or morex_contig_95399:1-9263). The coordinates are 1-based (as opposed to 0-based as in the second column of BED files). This file contains very long lines as each contig/scaffold sequence is printed on a single line without breaks.
License: CC BY 4.0 (Creative Commons Attribution)
DOI: 10.5447/ipk/2016/30
Content: 0 Directories 1 Files (4.5 GB)
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| PUBLISHER: | e!DAL - Plant Genomics and Phenomics Research Data Repository (PGP), IPK Gatersleben, Seeland OT Gatersleben, Corrensstraße 3, 06466, Germany |
| SIZE: | 4.5 GB |
| SUBJECT: | barley, Hordeum vulgare, genome assembly, genome annotation, sequence resource, next-generation sequencing |