Abstract: The data includes the fasta file for the 11 assembled pseudomolecules, the fasta files for gene cds and peptide sequences as well as GFF annotation files for genes and tRNAs. In the case of more than one splice variant per gene locus the longest cds was used as representative gene model. The results described in the bioRxiv preprint "Chromosome-scale assembly of the lablab genome - A model for inclusive orphan crop genomics" (https://doi.org/10.1101/2022.05.08.491073) are based on this data set. Data management and annotation was supported by de.NBI (www.denbi.de, 031A536, German Ministry of Education and Research).
License: CC BY 4.0 (Creative Commons Attribution)
DOI: 10.5447/ipk/2022/26
Content: 0 Directories 5 Files (468.2 MB)
| CONTRIBUTOR: |
Isaac Njaci,
Bernice Waweru,
Nadia Kamal,
Meki Muktar,
David Fisher,
Collins Muthini Muli,
Lucy Muthui,
Mary Maranga,
Davies Kaimenyi,
Brigitte Maass,
Peter Emmrich,
Jean-Baka Domelevo Entfellner,
Manuel Spannagl,
Mark Chapman,
Oluwaseyi Shorinola,
Chris Jones
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| CREATOR: |
Heidrun Gundlach
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| PUBLISHER: | e!DAL - Plant Genomics and Phenomics Research Data Repository (PGP), IPK Gatersleben, Seeland OT Gatersleben, Corrensstraße 3, 06466, Germany |
| SIZE: | 468.2 MB |
| SUBJECT: | Lablab purpureus, orphan crop, genome sequence assembly, long read sequencing, gene annotation, collaboration, bioinformatic capacity building |