Citation: M. Mascher (2019-09-16): Source code of the TRITEX assembly pipeline. DOI:10.5447/ipk/2019/19

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Abstract: Source code of the TRITEX pipeline for chromosome-scale assembly of Triticeae genomes. The most recent source code version is accessible from a public Bitbucket repository (https://bitbucket.org/tritexassembly/tritexassembly.bitbucket.io). This DOI holds the source code as of September 16th 2019 (commit: 7041ff2). A detailed usage guide can be found here: https://tritexassembly.bitbucket.io. The pipeline is described in the preprint Monat al. (2019) BioRxiv, https://doi.org/10.1101/631648.

License: CC BY 4.0 (Creative Commons Attribution)

DOI: 10.5447/ipk/2019/19

Content: 4 Directories 43 Files (1.2 MB)

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Metadata
CONTRIBUTOR:
CREATOR:
Martin Mascher [Show full information]
PUBLISHER: e!DAL - Plant Genomics and Phenomics Research Data Repository (PGP), IPK Gatersleben, Seeland OT Gatersleben, Corrensstraße 3, 06466, Germany
SIZE: 38.2 KB
SUBJECT: genome sequence asssembly, reference genome sequence, short-read assembly, source code, barley, Hordeum vulgare, wheat, Triticum spp., Triticeae
COVERAGE: none
DATE: Event: event
CREATED: TimePoint: Mon Sep 16 14:59:01 CEST 2019
UPDATED: TimePoint: Mon Sep 16 14:59:01 CEST 2019
LANGUAGE: en
RELATION: none
SOURCE: none
Revision: 0 - CreationDate: Mon Sep 16 14:59:01 CEST 2019 - RevisionDate: Mon Sep 16 14:59:01 CEST 2019