Citation: N. Narisetti et al. (2023-06-05): AWN phenotyping tool- v0.1. DOI:10.5447/ipk/2023/13
Abstract: Consideration of the properties of awns is important for the phenotypic description of grain crops. Awns have a number of important functions in grasses, including assimilation, mechanical protection and seed dispersal and burial. An important feature of the awn is the presence or absence of barbs, - tiny hook-like single-celled trichomes on the outer awn surface that can be visualized using microscopic imaging. The awn phenotyping tool performs the automated analysis (detection and quantification) of these small, semi-transparent structures in a high-throughput manner. The project folder contains both Linux and Windows compiled version tools to download and use for the end users.
License: CC0 1.0 Universal (Creative Commons Public Domain Dedication)
DOI: 10.5447/ipk/2023/13
Content: 3 Directories 0 Files (460.5 MB)
| AWN_Phenotyping_tool | 229.3 MB |
| EULA.txt | 4.8 KB |
| readme.txt | 3.5 KB |
| requiredMCRProducts.txt | 66 B |
| run_AWN_Phenotyping_tool.sh | 1.1 KB |
| user_guidelines.txt | 2.4 KB |
| CONTRIBUTOR: |
Muhammad Awais,
Muhammad Khan,
Frieder Stolzenburg,
Nils Stein
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| CREATOR: |
Narendra Narisetti,
Evgeny Gladilin
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| PUBLISHER: | Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Seeland OT Gatersleben, Corrensstraße 3, 06466, Germany |
| SIZE: | 229.3 MB |
| SUBJECT: | Image analysis, Computer vision, Plant phenotyping, Barley awn |