Abstract: Genome sequence assemblies in FASTA format for barley (Hordeum vulgare) cv. Morex. Assemblies were constructed by scaffolding BAC-based sequences (Mascher et al. 2017, Nature [doi:10.1038/nature22043], sequences available from doi:10.5447/IPK/2016/30) using Chicago in-vitro proximity ligation and the Dovetail HiRise algorithm (Putnam et. al. 2016, Genome Research [doi:10.1101/gr.193474.115]). The positional information contained in the two TXT files is described in the README file.
License: CC BY 4.0 (Creative Commons Attribution)
DOI: 10.5447/ipk/2019/6
| Barley_Morex_Dovetail_assembly_input_breaks.txt | 24.7 KB |
| Barley_Morex_Dovetail_assembly_table.txt | 20 MB |
| Barley_Morex_Dovetail_assembly.fasta | 4.5 GB |
| README.txt | 1.4 KB |
| CONTRIBUTOR: | |
| CREATOR: |
Martin Mascher
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| PUBLISHER: | e!DAL - Plant Genomics and Phenomics Research Data Repository (PGP), IPK Gatersleben, Seeland OT Gatersleben, Corrensstraße 3, 06466, Germany |
| SIZE: | 0 B |
| SUBJECT: | barley, Hordeum vulgare, genome sequence assembly, short-read assembly, in vitro proximity ligation |