Abstract: Example of a guide map file for use in the TRITEX assembly pipeline [doi:10.1186/s13059-019-1899-5]. The guide map is provided in RDS format (serialized R object) for direct use in the TRITEX pipeline, and in a tabular text file in TSV format. This example uses the POPSEQ genetic map of the barley genome [doi:10.1111/tpj.12319].
License: CC BY 4.0 (Creative Commons Attribution)
DOI: 10.5447/ipk/2020/28
Content: 0 Directories 2 Files (148.8 MB)
| Morex_IBSC2012_WGS_assembly_POPSEQ_info.Rds | 18.2 MB |
| Morex_IBSC2012_WGS_assembly_POPSEQ_info.tsv | 130.6 MB |
| CONTRIBUTOR: | |
| CREATOR: |
Martin Mascher
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| PUBLISHER: | e!DAL - Plant Genomics and Phenomics Research Data Repository (PGP), IPK Gatersleben, Seeland OT Gatersleben, Corrensstraße 3, 06466, Germany |
| SIZE: | 148.8 MB |
| SUBJECT: | genome assembly, genetic map, barley, next-generation sequencing |